Download MicrobeMS

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MicrobeMS is available in two different editions, in (i) a stand-alone Windows 64-bit version requiring the Matlab Compiler Runtime (MCR) 64-bit and (ii) a Matlab pcode toolbox version requiring Matlab R2014 (Windows OS) or later.

Please note that you accept with downloading the license conditions of MicrobeMS.


NEW - Microbe MS 0.80 stand-alone 64-bit version, the most actual version from February 2017. To download the installer for this edition of MicrobeMS please use the link below

    microbems.v.080.setup.zip

Microbe MS 0.78 stand-alone 64-bit version from November 2016.

    microbems.v.078.setup.zip

Please use the following links to download the MicrobeMS software in the Matlab pcode versions 0.78 and 0.73.


MicrobeMS version 0.78 pcode (November 2016):

    pcode-microbems-v078.zip


MicrobeMS version 0.73 pcode (June 2015):

    pcode-microbems-v073.zip


MALDI-TOF mass spectra from strains of Escherichia coli (zip archive, Bruker Daltonics MS data format):

    Escherichia.zip


MALDI-TOF mass spectra from strains of Escherichia coli (Matlab data format, structure array spec),
see also Data Format of Spectral Multifiles (*.muf):

    ecoli-filelist-oct16.muf


Peak list files obtained from mass spectra of strains of Escherichia coli (Matlab data format, structure array C),
see also Peaks List Files (*.pkf) to obtain information on the file format.

    ecoli-peaklist-oct16.pkf


MS Excel template required to define and transfer metadata items into MicrobeMS,
for file format information see Adding / Editing Metadata of MALDI-TOF Mass Spectral Data

    MALDI-Fields.xls


Download the most actual database versions with microbial MALDI-TOF mass spectra:

    MALDI-TOF Mass Spectrometry Databases from the RKI at ZENODO